The detailed information of tRNA gene sequence


Sequence ID>C161043651
Genome IDCP012700
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingopyxis macrogoltabida EY-1 [CP012700]
Start position on genome 1889556
End posion on genome 1889645
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tccgccgtgc
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGGGTGCAAGCTCA
CCGTGGGTTCGAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
cgcgctttca
Secondary structure (Cloverleaf model)
>C161043651	Ser	TGA
                   c      GCCA cgcgctttca
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGTGCAAGCTCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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