The detailed information of tRNA gene sequence


Sequence ID>C161049116
Genome IDCP012996
Search identical group
Phylum/ClassBacteroidota
SpeciesPedobacter sp. PACM 27299 PAMC 27299 [CP012996]
Start position on genome 251372
End posion on genome 251462
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccgcaaaaa
tRNA gene sequence 
GGAGAGATGTCCGAGTGGCTGAAGGAGCACGCTTGGAAAGCGTGTGTACCTCAAAAGGGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCGA
Downstream region at tRNA end position 
attacaaaag
Secondary structure (Cloverleaf model)
>C161049116	Ser	GGA
                   a      GCGA attacaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTACCTCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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