The detailed information of tRNA gene sequence


Sequence ID>C161049175
Genome IDCP012996
Search identical group
Phylum/ClassBacteroidota
SpeciesPedobacter sp. PACM 27299 PAMC 27299 [CP012996]
Start position on genome 1950300
End posion on genome 1950211
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttttgcgcc
tRNA gene sequence 
GGAGAGTTGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGACTTGTCAAAGGGT
CCGCGGGTTCGAATCCCCCACTCTCCGCAA
Downstream region at tRNA end position 
ctaggtgact
Secondary structure (Cloverleaf model)
>C161049175	Ser	TGA
                   c      GCAA ctaggtgact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
      T G A        G      |   | | |     G
    G       G A C G       G C G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTTGTCAAAGGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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