The detailed information of tRNA gene sequence


Sequence ID>C161049499
Genome IDCP013015
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCandidatus Desulfofervidus auxilii HS1 [CP013015]
Start position on genome 1295593
End posion on genome 1295669
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaatgatgg
tRNA gene sequence 
CGCGGGGTGGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAGGGTTCAAA
TCCCTCCCCCGCTACCA
Downstream region at tRNA end position 
aaaataaaga
Secondary structure (Cloverleaf model)
>C161049499	Met	CAT
                   g      ACCA aaaataaaga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    T       C G A G       G A G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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