The detailed information of tRNA gene sequence


Sequence ID>C161049503
Genome IDCP013015
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCandidatus Desulfofervidus auxilii HS1 [CP013015]
Start position on genome 1540937
End posion on genome 1541014
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcccaccaat
tRNA gene sequence 
GTCCCCATCGTCTAGCCCGGTCCAGGACACCGGCCTTTCACGCCGGCAACAGGGGTTCAA
ATCCCCTTGGGGACGCCA
Downstream region at tRNA end position 
aatatgaatg
Secondary structure (Cloverleaf model)
>C161049503	Glu	TTC
                   t      GCCA aatatgaatg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     A
  C         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     CAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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