The detailed information of tRNA gene sequence


Sequence ID>C161049505
Genome IDCP013015
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCandidatus Desulfofervidus auxilii HS1 [CP013015]
Start position on genome 1665842
End posion on genome 1665935
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tggcaggcgG
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGCTGGGTCCTTAAAAGGG
ACTCCGCAGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
aatgaggaga
Secondary structure (Cloverleaf model)
>C161049505	Ser	TGA
                   G      GCCA aatgaggaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGGGTCCTTAAAAGGGACTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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