The detailed information of tRNA gene sequence


Sequence ID>C161049524
Genome IDCP013015
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesCandidatus Desulfofervidus auxilii HS1 [CP013015]
Start position on genome 1106158
End posion on genome 1106061
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
catctttttt
tRNA gene sequence 
GGAAGCGGACGGCTCCTGGTGGGGCCCCTGGACTTCAAATCCAGTGACCGGCACGGAAAG
GTGTCGGTGGTGGGTTCGATTCCCATGCGCTTCCGCCA
Downstream region at tRNA end position 
taaaaggtag
Secondary structure (Cloverleaf model)
>C161049524	SeC(p)	TCA
                   t      GCCA taaaaggtag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C C        C      + | | | |     G
    G       T C G G       G T G G G     C
    G       + | | |                 T T
    T       G G C C
      G G          C     TGACCGGCACGGAAAGGTGTCGGTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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