The detailed information of tRNA gene sequence


Sequence ID>C161050781
Genome IDCP013068
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPannonibacter phragmitetus 31801 [CP013068]
Start position on genome 4017319
End posion on genome 4017408
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttgcagaac
tRNA gene sequence 
GGAAGAGTGGCCGAGTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTAGGTGAGAGCCTA
CCGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
actatttttt
Secondary structure (Cloverleaf model)
>C161050781	Ser	TGA
                   c      GCCA actatttttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTAGGTGAGAGCCTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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