The detailed information of tRNA gene sequence


Sequence ID>C161051042
Genome IDCP013106
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas huangheensis BJGMM-B45 [CP013106]
Start position on genome 3411887
End posion on genome 3411811
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcgcaagac
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGCTGGTTCGAG
TCCAGCTGGGCCCACCA
Downstream region at tRNA end position 
ttaaaatcag
Secondary structure (Cloverleaf model)
>C161051042	Met	CAT
                   c      ACCA ttaaaatcag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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