The detailed information of tRNA gene sequence


Sequence ID>C161051082
Genome IDCP013111
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella sp. N [CP013111]
Start position on genome 6986323
End posion on genome 6986410
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aggcgtagca
tRNA gene sequence 
GGAAGGATGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCGATGGGAAACTATCC
GTGGGTTCGAATCCCACTCCTTCCGCCA
Downstream region at tRNA end position 
gcagcttttg
Secondary structure (Cloverleaf model)
>C161051082	Ser	TGA
                   a      GCCA gcagcttttg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGATGGGAAACTATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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