The detailed information of tRNA gene sequence


Sequence ID>C161051818
Genome IDCP013133
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia rhipicephali HJ#5 [CP013133]
Start position on genome 714411
End posion on genome 714487
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaaattataa
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTTAGAGCATTACGCTGACATCGTAAAGGTCAGGGGTTCAAC
TCCCCTATCGCCCACCA
Downstream region at tRNA end position 
gcatacagtc
Secondary structure (Cloverleaf model)
>C161051818	Val	GAC
                   a      ACCA gcatacagtc
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     A - T
                     T - A          T C
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  C       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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