The detailed information of tRNA gene sequence


Sequence ID>C161051830
Genome IDCP013133
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia rhipicephali HJ#5 [CP013133]
Start position on genome 601093
End posion on genome 601017
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
caatatattt
tRNA gene sequence 
GCATTCGTAGCTCAGCTGGATAGAGCGTTGCCCTCCGAAGGCAAAGGTCGTTGGTTCAAA
TCCAATCGAATGCACCA
Downstream region at tRNA end position 
tacactaaat
Secondary structure (Cloverleaf model)
>C161051830	Arg	CCG
                   t      ACCA tacactaaat
                     G - C
                     C - G
                     A - T
                     T - A
                     T - A
                     C - G
                     G - C          T A
                    T     T A A C C     A
      C G A        A      + | | | |     A
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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