The detailed information of tRNA gene sequence


Sequence ID>C161052673
Genome IDCP013187
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas phenolica KCTC 12086 [CP013187, CP013188]
Start position on genome 2221774
End posion on genome 2221685
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggcgcaagt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAGGCGCACGACTGGAACTCGTGTATAGGCTAACCCCTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttcctcatta
Secondary structure (Cloverleaf model)
>C161052673	Ser	GGA
                   t      GCCA ttcctcatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TATAGGCTAACCCCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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