The detailed information of tRNA gene sequence


Sequence ID>C161053907
Genome IDCP013244
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Viadribacter manganicus A272 [CP013244]
Start position on genome 3537048
End posion on genome 3536958
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcccccgcc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCACTCCCTTGCTAAGGGAGCATACGTTAACCGCGT
ATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ccgcttcacc
Secondary structure (Cloverleaf model)
>C161053907	Ser	GCT
                   c      GCCA ccgcttcacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACGTTAACCGCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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