The detailed information of tRNA gene sequence


Sequence ID>C161053920
Genome IDCP013244
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Viadribacter manganicus A272 [CP013244]
Start position on genome 612099
End posion on genome 612011
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgagatcgt
tRNA gene sequence 
GGAGCCGTGGCCGAGCGGTAAGGCAGCGGATTGCTAATCCGTAGCACTCGAACGGGTGTC
GTCAGGTTCGAATCCTGCCGGCTCCGCCA
Downstream region at tRNA end position 
atctcgtgga
Secondary structure (Cloverleaf model)
>C161053920	Ser	GCT
                   t      GCCA atctcgtgga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        G        | | | |     G
      C     G C C G       T C A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     AGCACTCGAACGGGTGTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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