The detailed information of tRNA gene sequence


Sequence ID>C161057645
Genome IDCP013611
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas rubra SCSIO 6842 [CP013611, CP013612]
Start position on genome 102148
End posion on genome 102221
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aatacaatgc
tRNA gene sequence 
GGCGGAATGGCAGAGTGGCCATGCAGCGGATTGCAAATCCGTCTACCTCGGTTCGACTCC
GGGTTCCGCCTCCA
Downstream region at tRNA end position 
tttccttatt
Secondary structure (Cloverleaf model)
>C161057645	Cys	GCA
                   c      TCCA tttccttatt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    T     G G G C C     A
        G A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     CTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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