The detailed information of tRNA gene sequence


Sequence ID>C161057689
Genome IDCP013611
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas rubra SCSIO 6842 [CP013611, CP013612]
Start position on genome 3788375
End posion on genome 3788300
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tttcgaatgt
tRNA gene sequence 
GGGTTGTTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCAAGT
CCAGTACAACCCACCA
Downstream region at tRNA end position 
ttaattggtg
Secondary structure (Cloverleaf model)
>C161057689	Val	TAC
                   t      ACCA ttaattggtg
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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