The detailed information of tRNA gene sequence


Sequence ID>C161057710
Genome IDCP013611
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas rubra SCSIO 6842 [CP013611, CP013612]
Start position on genome 2869494
End posion on genome 2869402
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttgcgcc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATAGGGTTTGTAGCC
CTATCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
ttgcttttaa
Secondary structure (Cloverleaf model)
>C161057710	Ser	GCT
                   c      GCCA ttgcttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTTGTAGCCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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