The detailed information of tRNA gene sequence


Sequence ID>C161062478
Genome IDCP013944
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPiscirickettsia salmonis PSCGR01 [CP013944]
Start position on genome 3078668
End posion on genome 3078592
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tccgtcgagt
tRNA gene sequence 
CGGGGCATGGCGCAGCCTGGTAGCGCACCTGTTTTGGGTACAGGGGGTCGGAAGTTCGAA
TCTTCCTGTCCCGACCA
Downstream region at tRNA end position 
ttttcgctat
Secondary structure (Cloverleaf model)
>C161062478	Pro	TGG
                   t      ACCA ttttcgctat
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T          T A
                    T     C C T T C     A
      C G A        G      | | | | |     G
    C       C G C G       G G A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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