The detailed information of tRNA gene sequence


Sequence ID>C161069016
Genome IDCP014230
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfomicrobium orale DSM 12838 [CP014230]
Start position on genome 471068
End posion on genome 471161
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccgcatggag
tRNA gene sequence 
GGAGGCGTGTTCGTTCCGGTGAGCGGCCCGGTCTTCAAAACCGGTGGAAGGTCGAGAGAT
CTTCGGTAGGTTCGACCCCTATACGCCTCCGCCA
Downstream region at tRNA end position 
tttccttccg
Secondary structure (Cloverleaf model)
>C161069016	SeC(p)	TCA
                   g      GCCA tttccttccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          C C
                    G     T A T C C     A
      C C T        T      + | | | |     G
    G       T G C T       G T A G G     C
    G       + | | +                 T T
    T       G C G G
      G A          C     TGGAAGGTCGAGAGATCTTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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