The detailed information of tRNA gene sequence


Sequence ID>C161071268
Genome IDCP014334
Search identical group
Phylum/ClassThermotogota
SpeciesFervidobacterium islandicum AW-1 [CP014334]
Start position on genome 1055246
End posion on genome 1055333
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
actgctggat
tRNA gene sequence 
GGAGGCGTGTCCGAATGGCTAAGGAGCCGGTCTCGAAAATCGGTGGACCTTACGGTCCTT
GTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
ttttttatta
Secondary structure (Cloverleaf model)
>C161071268	Ser	CGA
                   t      GCCA ttttttatta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T A          G     TGGACCTTACGGTCCTT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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