The detailed information of tRNA gene sequence


Sequence ID>C161071815
Genome IDCP014349
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorrelia hermsii HS1 [CP014349]
Start position on genome 201554
End posion on genome 201626
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgtttaacgt
tRNA gene sequence 
GGCGCTGTACCCAAGTGGCTAAGGGAAAAGTCTGCAAAACTTTGATTCGCCGGTTCGATT
CCGGTCGGCGCCTtgt
Downstream region at tRNA end position 
aagccttaag
Secondary structure (Cloverleaf model)
>C161071815	Cys	GCA
                   t      Ttgt aagccttaag
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     G - C          T T
                    T     T G G C C     A
      T G A        A      + | | | |     G
    G       A C C C       G C C G G     C
    G         | | |                 T T
    C       A G G G
      T A          A     GATTC
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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