The detailed information of tRNA gene sequence


Sequence ID>C161071817
Genome IDCP014349
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorrelia hermsii HS1 [CP014349]
Start position on genome 217867
End posion on genome 217940
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttacttatg
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCACCCGACTCATAATCGGGCGGTCCCAGGTTCAAG
TCCTGGTGGGCCCAaac
Downstream region at tRNA end position 
tattttaatt
Secondary structure (Cloverleaf model)
>C161071817	Met	CAT
                   g      Aaac tattttaatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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