The detailed information of tRNA gene sequence


Sequence ID>C161078726
Genome IDCP014865
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia prowazekii Naples-1 [CP014865]
Start position on genome 338569
End posion on genome 338643
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cattttatat
tRNA gene sequence 
TCCTCGGTAGCTCAGTGGTAGAGCAAACGGCTGTTAACCGTTCGGTCGCTGGTTCGAGTC
CGGCCCGGGGAGCCA
Downstream region at tRNA end position 
ctcgttagtt
Secondary structure (Cloverleaf model)
>C161078726	Asn	GTT
                   t      GCCA ctcgttagtt
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     C G G C C     A
        G A        A      | | + | |     G
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     CGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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