The detailed information of tRNA gene sequence


Sequence ID>C161078927
Genome IDCP014869
Search identical group
Phylum/ClassActinomycetota
SpeciesBrevibacterium linens BS258 [CP014869]
Start position on genome 96297
End posion on genome 96203
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gatgaccggt
tRNA gene sequence 
GGAGGCGTCCGTGTCCTGGTGGGCGCCCTGGTCTTCAAAACCAGTGAGACCGAGTATCTC
GGTCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
gacatcgtcc
Secondary structure (Cloverleaf model)
>C161078927	SeC(p)	TCA
                   t      GCCA gacatcgtcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      T C C        C      + | | | |     G
    G       T G T G       G C G G G     C
    G       + | + |                 T T
    T       G C G C
      G G          C     TGAGACCGAGTATCTCGGTCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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