The detailed information of tRNA gene sequence


Sequence ID>C161084175
Genome IDCP015162
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum Amoy [CP015162]
Start position on genome 54388
End posion on genome 54460
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtgcgtcac
tRNA gene sequence 
CGCAGGGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGCCGGAGGTTCGAGT
CCTCTCCCTGCTAtat
Downstream region at tRNA end position 
tccgttcatt
Secondary structure (Cloverleaf model)
>C161084175	Met	CAT
                   c      Atat tccgttcatt
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T G A        G      + | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGCC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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