The detailed information of tRNA gene sequence


Sequence ID>C161084176
Genome IDCP015162
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum Amoy [CP015162]
Start position on genome 106704
End posion on genome 106776
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgtctgtgtt
tRNA gene sequence 
GCTTCTGTAGCTCAGTTGGCAGAGCGCAACCATGGTAAGGTTGAGGTCAGCGGTTCAATC
CCGCTCGGAAGCTtcc
Downstream region at tRNA end position 
gtctgtggat
Secondary structure (Cloverleaf model)
>C161084176	Thr	GGT
                   t      Ttcc gtctgtggat
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     T + G
                     G - C          C T
                    T     T C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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