The detailed information of tRNA gene sequence


Sequence ID>C161084179
Genome IDCP015162
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum Amoy [CP015162]
Start position on genome 388590
End posion on genome 388664
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgtagtcatc
tRNA gene sequence 
GCCAACTTAGCTCAGTCGGTCTAGAGCGCGTGATTTGTAATCTCGAGGTCTAGGGTTCGA
ATCCCTAAGTTGGCTtgt
Downstream region at tRNA end position 
tcgtttgggg
Secondary structure (Cloverleaf model)
>C161084179	Thr	TGT
                   c      Ttgt tcgtttgggg
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     C - G
                     T - A          T A
                    T     A T C C C     A
    C T G A        A      | | | | |     G
  G         C T C G       T A G G G     C
  G         | | | |                 T T
  T         G A G C
    C T A          G     AGGTC
                    C - G
                    G - C
                    T   T
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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