The detailed information of tRNA gene sequence


Sequence ID>C161084182
Genome IDCP015162
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum Amoy [CP015162]
Start position on genome 405954
End posion on genome 406036
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tctcttccgT
tRNA gene sequence 
GCGAGAGTGGTGGAATCGGCAGACACGCTAGACTTAGGATCTAGTGCCTCTGGCATGAGG
GTTCAAGTCCCTCCTCTCGCAGgg
Downstream region at tRNA end position 
cgcctgtgcg
Secondary structure (Cloverleaf model)
>C161084182	Leu	TAG
                   T      AGgg cgcctgtgcg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    C       G G T G       G A G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGCCTCTGGCAT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.-

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