The detailed information of tRNA gene sequence


Sequence ID>C161086682
Genome IDCP015376
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAnaplasma phagocytophilum str. Norway variant2 [CP015376]
Start position on genome 1163440
End posion on genome 1163367
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttataagct
tRNA gene sequence 
AGGAGTGTAGTTCAATGGTAGAACATCAGTCTCCAAAACTGAGAGTATGGGTTCGACTCC
TGTCACTCCTGCCA
Downstream region at tRNA end position 
taatttcgta
Secondary structure (Cloverleaf model)
>C161086682	Trp	CCA
                   t      GCCA taatttcgta
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T C
                    T     T G T C C     A
        A A        A      | + + | |     G
      T     C T T G       A T G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     GAGT
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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