The detailed information of tRNA gene sequence


Sequence ID>C161086849
Genome IDCP015379
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHafnia alvei HUMV-5920 [CP015379]
Start position on genome 4126013
End posion on genome 4126102
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgataaac
tRNA gene sequence 
GGTGAGGTGTCTGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGCGAAAGCGTA
TCGAGGGTTCGAACCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
tattctaaca
Secondary structure (Cloverleaf model)
>C161086849	Ser	GGA
                   c      GCCA tattctaaca
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          C A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      T G A        G     TATACGCGAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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