The detailed information of tRNA gene sequence


Sequence ID>C161089139
Genome IDCP015515
Search identical group
Phylum/ClassActinomycetota
SpeciesRathayibacter tritici NCPPB 1953 [CP015515]
Start position on genome 602489
End posion on genome 602580
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgggcgctca
tRNA gene sequence 
GGAGTCGTCGCATAGTCCGGTCGAGTGCACCACCCTGCTAAGGTGGAGAGCCCTTTATTG
GGTTCCGTGGGTTCAAATCCCACCGACTCCGCtc
Downstream region at tRNA end position 
cgtccgaagg
Secondary structure (Cloverleaf model)
>C161089139	Ser	GCT
                   a      GCtc cgtccgaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     A
  C         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        A     AGAGCCCTTTATTGGGTTCC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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