The detailed information of tRNA gene sequence


Sequence ID>C161092146
Genome IDCP015910
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira hyodysenteriae ATCC 27164 B-78 [CP015910]
Start position on genome 1099917
End posion on genome 1099843
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttataaattT
tRNA gene sequence 
GGGTCAGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGCAGGTTCGACT
CCTGTCTGACCTGAtt
Downstream region at tRNA end position 
gttttctaaa
Secondary structure (Cloverleaf model)
>C161092146	Trp	CCA
                   T      GAtt gttttctaaa
                     G + T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T C
                    T     T G T C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C A G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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