The detailed information of tRNA gene sequence


Sequence ID>C161092148
Genome IDCP015910
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira hyodysenteriae ATCC 27164 B-78 [CP015910]
Start position on genome 540011
End posion on genome 539937
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattagacaT
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGCCGTAGGTTCAAGT
CCTGCCCCCGCTAAta
Downstream region at tRNA end position 
gccaataata
Secondary structure (Cloverleaf model)
>C161092148	Met	CAT
                   T      AAta gccaataata
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | + | | |     A
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGCC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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