The detailed information of tRNA gene sequence


Sequence ID>C161097042
Genome IDCP016396
Search identical group
Phylum/ClassActinomycetota
SpeciesMycobacterium avium RCAD0278 [CP016396]
Start position on genome 2276058
End posion on genome 2276152
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
catggtccag
tRNA gene sequence 
GGAGGCGTGTCCGGTCTGGTGACCGGCGCGGTCTTCAAAACCGTGGAACGGCAGACGCTG
CCGCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
tactccgtcg
Secondary structure (Cloverleaf model)
>C161097042	SeC(p)	TCA
                   g      GCCA tactccgtcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    G     T G C C C     A
      T C T        T      + | | | |     G
    G       G G C C       G C G G G     C
    G       | | | |                 T T
    T       C C G G
      G A          C     GGAACGGCAGACGCTGCCGCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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