The detailed information of tRNA gene sequence


Sequence ID>C161103921
Genome IDFP929053
Search identical group
Phylum/ClassBacillota
SpeciesRuminococcus sp. SR1/5 [FP929053]
Start position on genome 1723718
End posion on genome 1723631
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacattataT
tRNA gene sequence 
GGAGAGATATCGAAGTGGTCATAACGAGGCGGTCTTGAAAACCGTTTGTCCGCAAGGGCG
CGTGGGTTCGAATCCCACTCTCTCCGTtt
Downstream region at tRNA end position 
gtcaaataca
Secondary structure (Cloverleaf model)
>C161103921	Ser	TGA
                   T      GTtt gtcaaataca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGTCCGCAAGGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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