The detailed information of tRNA gene sequence


Sequence ID>C161105026
Genome IDHE984298
Search identical group
Phylum/ClassCampylobacterota
SpeciesHelicobacter heilmannii ASB1.4 type strain:ASB1.4 [HE984298]
Start position on genome 1555492
End posion on genome 1555579
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcttttctt
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTTGAAGGAGCACGCCTGGAACGCGTGTAAGGTGCAAGCCTTC
AAGGGTTCGAATCCCTTTCTCTCCGCCA
Downstream region at tRNA end position 
tttttcccta
Secondary structure (Cloverleaf model)
>C161105026	Ser	GGA
                   t      GCCA tttttcccta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       A A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAAGGTGCAAGCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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