The detailed information of tRNA gene sequence


Sequence ID>C161105070
Genome IDHG315671
Search identical group
Phylum/ClassBacteroidota
SpeciesFormosa agariphila KMM 3901 type strain: KMM 3901 [HG315671]
Start position on genome 1071862
End posion on genome 1071948
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catgaattta
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTAATGGAGCAGATTGCTAATCTGTCGACGGGTAACTGTCGCC
AGGGTTCGAGTCCCTGTCTCTCCGCAA
Downstream region at tRNA end position 
ttaatcttta
Secondary structure (Cloverleaf model)
>C161105070	Ser	GCT
                   a      GCAA ttaatcttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     G T C C C     A
        G A        G      | | | | |     G
      T     G A C C       C A G G G     C
      G       | | |                 T T
      G     A T G G
        T A        A     CGACGGGTAACTGTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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