The detailed information of tRNA gene sequence


Sequence ID>C161105078
Genome IDHG315671
Search identical group
Phylum/ClassBacteroidota
SpeciesFormosa agariphila KMM 3901 type strain: KMM 3901 [HG315671]
Start position on genome 3773007
End posion on genome 3772931
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ataacgcaac
tRNA gene sequence 
GGTCTGGTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAA
TCCCGTCCAGACCGCAA
Downstream region at tRNA end position 
tattgctaaa
Secondary structure (Cloverleaf model)
>C161105078	Asp	GTC
                   c      GCAA tattgctaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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