The detailed information of tRNA gene sequence


Sequence ID>C161105090
Genome IDHG315671
Search identical group
Phylum/ClassBacteroidota
SpeciesFormosa agariphila KMM 3901 type strain: KMM 3901 [HG315671]
Start position on genome 3001627
End posion on genome 3001552
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgacttttat
tRNA gene sequence 
ACGGGCGTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGTGAGTTCGAGT
CTCTCCGCCCGTGCTA
Downstream region at tRNA end position 
ataaagtttt
Secondary structure (Cloverleaf model)
>C161105090	Trp	CCA
                   t      GCTA ataaagtttt
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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