The detailed information of tRNA gene sequence


Sequence ID>C161105092
Genome IDHG315671
Search identical group
Phylum/ClassBacteroidota
SpeciesFormosa agariphila KMM 3901 type strain: KMM 3901 [HG315671]
Start position on genome 2981702
End posion on genome 2981615
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaggcactca
tRNA gene sequence 
GGAGAATTGGCAGAGTGGTCGAATGCGGCAGTCTTGAAAACTGTTGAGGGTCACACCTCC
GGGGGTTCGAATCCCTCATTCTCCGCTA
Downstream region at tRNA end position 
aaaccccgta
Secondary structure (Cloverleaf model)
>C161105092	Ser	TGA
                   a      GCTA aaaccccgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAGGGTCACACCTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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