The detailed information of tRNA gene sequence


Sequence ID>C161105257
Genome IDHG966617
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Phaeomarinobacter ectocarpi Ec32 [HG966617]
Start position on genome 1507531
End posion on genome 1507604
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttcaggatga
tRNA gene sequence 
GGCCACGTGGCGGAGTGGTTACGTGCCGGACTGCAAATCCGTTTACCCCGGTTCGATTCC
GGGCGTGGCCTCCA
Downstream region at tRNA end position 
actttcccac
Secondary structure (Cloverleaf model)
>C161105257	Cys	GCA
                   a      TCCA actttcccac
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     G G G C C     A
        G A        G      | | | | |     G
      T     G G C G       C C C G G     C
      G       | | +                 T T
      G     A C G T
        T T        G     TTAC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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