The detailed information of tRNA gene sequence


Sequence ID>C161105270
Genome IDHG966617
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Phaeomarinobacter ectocarpi Ec32 [HG966617]
Start position on genome 2192851
End posion on genome 2192775
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatgacggtg
tRNA gene sequence 
GGGCCGGTAGCTCAGTTGGTTAGAGCGGTCCGCTCATAACGGATTGGTCGCAGGTTCAAG
TCCTGCCCGGCCCACCA
Downstream region at tRNA end position 
cttttgccat
Secondary structure (Cloverleaf model)
>C161105270	Met	CAT
                   g      ACCA cttttgccat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    G + T
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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