The detailed information of tRNA gene sequence


Sequence ID>C161105278
Genome IDHG966617
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Phaeomarinobacter ectocarpi Ec32 [HG966617]
Start position on genome 1539772
End posion on genome 1539696
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttggctcggt
tRNA gene sequence 
CGGGGCATGGCGCAGCCCGGTAGCGCACCTGTTTTGGGAACAGGGGGTCAGAGGTTCGAA
TCCTCTTGCCCCGACCA
Downstream region at tRNA end position 
ttttttcctt
Secondary structure (Cloverleaf model)
>C161105278	Pro	TGG
                   t      ACCA ttttttcctt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T C T C C     A
      C G A        G      | | | | |     G
    C       C G C G       A G A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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