The detailed information of tRNA gene sequence


Sequence ID>C161106314
Genome IDLN831039
Search identical group
Phylum/ClassActinomycetota
SpeciesMycolicibacterium smegmatis NCTC8159 [LN831039]
Start position on genome 2000830
End posion on genome 2000736
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gatgggtcac
tRNA gene sequence 
GGAGGCGTATCCGGTCTGGTGACCGGCGCGGTCTTCAAAATCGCTGAGCGACAGTTTCTG
CCGCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
tcgaatgcca
Secondary structure (Cloverleaf model)
>C161106314	SeC	TCA
                   c      GCCA tcgaatgcca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    A     T G C C C     A
      T C T        T      + | | | |     G
    G       G G C C       G C G G G     C
    G       | | | |                 T T
    T       C C G G
      G A          C     TGAGCGACAGTTTCTGCCGCTG
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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