The detailed information of tRNA gene sequence


Sequence ID>C161107079
Genome IDLN879502
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia naegleriophila KNic [LN879502]
Start position on genome 1248622
End posion on genome 1248694
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttattgaatc
tRNA gene sequence 
GGGGGCTTAGCTTAGTTGGTAGAGCGTCTGATTTGCATTCAGAAGGTCAGGAGTTCGAAT
CTCCTAGCCTCCAaga
Downstream region at tRNA end position 
tttgcacttg
Secondary structure (Cloverleaf model)
>C161107079	Ala	TGC
                   c      Aaga tttgcacttg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       T T C G       A G G A G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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