The detailed information of tRNA gene sequence


Sequence ID>C161107102
Genome IDLN879502
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia naegleriophila KNic [LN879502]
Start position on genome 1589420
End posion on genome 1589348
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cccttcaaac
tRNA gene sequence 
GCTGGCATAGCTCAACTGGTAGAGCACCCGACTTGTAATCGGACGGTTGTGGGTTCAAGT
CCTACTGCCAGCAttt
Downstream region at tRNA end position 
gtttcccata
Secondary structure (Cloverleaf model)
>C161107102	Thr	TGT
                   c      Attt gtttcccata
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     C A T C C     A
      C A A        A      | | + | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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