The detailed information of tRNA gene sequence


Sequence ID>C161108080
Genome IDLN907867
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBlastochloris viridis [LN907867]
Start position on genome 1960572
End posion on genome 1960647
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctctcgcgcc
tRNA gene sequence 
GGGCCCGTAGCTCAATGGTCAGAGCCGGCGGCTCATAACCGCTTGGTTGCAGGTTCGAAT
CCTGCCGGGCCTACCA
Downstream region at tRNA end position 
gcgcgcgcat
Secondary structure (Cloverleaf model)
>C161108080	Met	CAT
                   c      ACCA gcgcgcgcat
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      C A          C     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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