The detailed information of tRNA gene sequence


Sequence ID>C161108253
Genome IDLN997842
Search identical group
Phylum/ClassActinomycetota
SpeciesStreptomyces reticuli [LN997842]
Start position on genome 5412292
End posion on genome 5412367
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cccgggcctt
tRNA gene sequence 
GTGGGTGTAGCTCAGCGGAAGAGCGCCGGTCTCCAAAACCGGGACGGCGGAGGTTCGACT
CCTCCCACCCGTGCGA
Downstream region at tRNA end position 
gcgcgtgaaa
Secondary structure (Cloverleaf model)
>C161108253	Trp	CCA
                   t      GCGA gcgcgtgaaa
                     G + T
                     T + G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    T     C C T C C     A
        G A        A      | | | | |     G
      C     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     GACGGC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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