The detailed information of tRNA gene sequence


Sequence ID>C162000035
Genome IDCP011918
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia cenocepacia ST32 [CP011917, CP011918, CP011919]
Start position on genome 1462898
End posion on genome 1462993
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttttccccac
tRNA gene sequence 
GGAAGGCATTCGTATCCGGTGGTACGGCCGGGCTTCAAACCCGGTTAGGGGCGTCAGACG
CTCCTGGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
cctcgttttt
Secondary structure (Cloverleaf model)
>C162000035	SeC	TCA
                   c      GCCA cctcgttttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C T        T      | + | | |     G
    G       A T G C       G T A G G     C
    G       | | | |                 T T
    T       T A C G
      G G          G     TTAGGGGCGTCAGACGCTCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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